I-DEEL: Inter-Disciplinary Ecology and Evolution Lab
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Preprints

Preprints are versions of manuscripts before they are submitted to publishers for peer-review. They are freely and openly accessible for everyone to read.

  1. Nakagawa S, Noble D, Lagisz M, Spake R, Viechtbauer W, Senior AM (2022) A robust and readily implementable method for the meta-analysis of response ratios with and without missing standard deviations. EcoEvoRxiv
  2. Anwer H, O'Dea RE, Mason D, Zajitschek S, Klinke A, Reid M, Hesselson D, Noble D, Morris M, Lagisz M, Nakagawa S (2022) The effects of an obesogenic diet on behaviour and cognition in zebrafish (Danio rerio): traits average, variability, repeatability, and behavioural syndromes. EcoEvoRxiv
  3. Culina A, Adriaensen F, Bailey LD, Burgess MD, Charmantier A, Cole EF, Eeva T, Matthysen E, Nater CR, Sheldon B, +105 authors  (2022) Connected data landscape of long-term ecological studies: the SPI-Birds data hub. EcoEvoRxiv
  4. Anwer H, Mason D, Zajitschek S, Hesselson D, Noble D, Morris M, Lagisz M, Nakagawa S (2022) Intergenerational effects of overfeeding on aversive learning in zebrafish (Danio rerio). EcoEvoRxiv
  5. Fraser H, Bush M, Wintle B, Mody F, Smith E, Hanea A, Gould E, Hemming V, Hamilton D, Rumpff L, +21 authors  (2022) ​Predicting reliability through structured expert elicitation with repliCATS (Collaborative Assessments for Trustworthy Science). MetaArXiv
  6. Pollo P, Nakagawa S, Kasumovic MM (2022) The better, the choosier: a meta-analysis on inter-individual variation of male mate choice. EcoEvoRxiv
  7. Tam J, Lagisz M, Cornwell W, Nakagawa S (2021) Quantifying research interests in 7,521 mammalian species with h-index: a case study. EcoEvoRxiv
  8. Yang Y, Hillebrand H, Lagisz M, Cleasby I, Nakagawa S (2021) Low statistical power and overestimated anthropogenic impacts, exacerbated by publication bias, dominate field studies in global change biology. EcoEvoRxiv
  9. Vendl C, Pottier P, Taylor MD, Braeunig J, Gibson MJ, Hesselson D, Neely GG, Lagisz M, Nakagawa S (2021) Thermal processing reduces PFAS concentrations in blue food – A systematic review and meta-analysis. EcoEvoRxiv
  10. Chin J, Nakagawa S, Lagisz M (2021) Where is the evidence in evidence-based law reform? MetaArXiv
  11. Anwer H, Morris M, Noble D, Nakagawa S, Lagisz M (2021) Transgenerational effects of obesogenic diets in rodents: a meta-analysis.  EcoEvoRxiv
  12. Foo YZ, O'Dea RE, Koricheva J, Nakagawa S, Lagisz M (2021) A practical guide to question formation, systematic searching and study screening for literature reviews in ecology and evolution. EcoEvoRxiv
  13. Nakagawa S, Lagisz M, Jennions MD, Koricheva J, Noble D, Parker TH, Sanchez-Tojar A, Yang Y, O'Dea RE (2021) Methods for testing publication bias in ecological and evolutionary meta-analyses. EcoEvoRxiv
  14. Anwer H, Mason D, Zajitschek S, Noble D, Hesselson D, Morris M, Lagisz M, Nakagawa S (2021) An efficient new assay for measuring zebrafish anxiety: tall tanks that better characterize between-individual differences. EcoEvoRxiv
  15. Atsumi K, Lagisz M, Nakagawa S (2021) Non-additive genetic effects induce novel phenotypic distributions in male mating traits of F1 hybrids. EcoEvoRxiv
  16. Nakagawa S, Senior AM, Viechtbauer W, Noble D (2021) An assessment of statistical methods for non-independent data in ecological meta-analyses: Comment. EcoEvoRxiv
  17. Cinar O, Nakagawa S, Viechtbauer W (2021) Phylogenetic multilevel meta-analysis: A simulation study on the importance of modeling the phylogeny. EcoEvoRxiv
  18. Schroeder J, Dugdale HL, Nakagawa S, Sparks AM, Burke T (2021) Social genetic effects (IGE) and genetic intra- and intersexual genetic correlation contribute to the total heritable variance in parental care. EcoEvoRxiv
  19. O'Dea RE, Noble D, Nakagawa S (2021) Unifying individual differences in personality, predictability, and plasticity: a practical guide. EcoEvoRxiv
  20. Hennessy EA, Acabchuk R, Arnold PA, Dunn AG, Foo YZ, Johnson BT, Geange SR, Haddaway NR, Nakagawa S, Mapanga W, Mengersen K, Page MJ, Sanchez-Tojar A, Welch V, McGuinness LA (2021) Ensuring Prevention Science Research is Synthesis-Ready for Immediate and Lasting Scientific Impact. MetaArXiv
  21. Kar F, Nakagawa S, Noble D (2021) Impact of Developmental Temperatures On The Repeatability of Thermal Plasticity in Metabolic Rate. EcoEvoRxiv
  22. Ralph A, Burke T, Nakagawa S, Sanchez-Tojar A, Schroeder J (2021) The causes and consequences of ornament variation in a natural population. EcoEvoRxiv
  23. Nakagawa S, Senior A, Viechtbauer W, Noble D (2021) An assessment of statistical methods for non-independent data in ecological meta-analyses: Comment. EcoEvoRxiv
  24. Haddaway NR, Dunn AG, Nakagawa S (2021) A protocol for a Delphi-style workshop to design a minimum standard for data reporting in systematic reviews. EcoEvoRxiv
  25. Rutkowska J, Lagisz M, Bonduriansky R, Nakagawa S (2020) Mapping the past, present and future research landscape of paternal effects. EcoEvoRxiv
  26. Lagisz M, Samarasinghe G, Santamouris M, Yenneti K, Upadhyay AK, De La Peña Suarez F, Taunk B, Nakagawa S (2020) A visualized overview of systematic reviews and meta-analyses on low-carbon built environments: an evidence review map. EcoEvoRxiv
  27. Lagisz M, Zidar J, Nakagawa S, Neville V, Sorato E, Paul ES, Bateson M, Mendl M, Løvlie H (2020) Optimism, pessimism and judgement bias in animals: a systematic review and meta-analysis. MetaArViv
  28. Nakagawa S, Lagisz M, O'Dea RE, Rutkowska J, Yang Y, Noble D, Senior AM (2020) The Orchard Plot: Cultivating a Forest Plot for Use in Ecology, Evolution and Beyond. EcoEvoRxiv
  29. Lara CE, Holtmann B, Santos ESA, Nakagawa S (2020) Tongue spots of dunnock nestlings vary in number and position over time but exert no clear influence on parental allocation. EcoEvoRxiv
  30. Haddaway NR, Dunn AG, Nakagawa S (2020) A protocol for a Delphi-style workshop to design a minimum standard for data reporting in systematic reviews. EcoEvoRxiv
  31. Nakagawa S, Schielzeth H (2020) Coefficient of determination R2 and intra-class correlation coefficient ICC from generalized linear mixed-effects models revisited and expanded. EcoEvoRxiv
  32. Nosek BA, Corker KS, Krall T, Grasty FL, Brooks III RE, Mellor DT, Van Tuyl S, Gurdal G, Mboa T, +115 authors (2020) NSF 19-501 AccelNet Proposal: Community of Open Scholarship Grassroots Networks (COSGN). MetaArXiv
  33. Haddaway NR, Dunn AG, Nakagawa S (2020) A protocol for a Delphi-style workshop to design a minimum standard for data reporting in systematic reviews. OSF Preprints
  34. Mathot K, Dingemanse N, Nakagawa S (2020) The covariance between metabolic rate and behaviour varies across behaviours and thermal types: meta-analytic insights. EcoEvoRxiv
  35. Kar F, Nakagawa S, Friesen CR, Noble D (2020) Individual variation in thermal plasticity and its impact on mass-scaling. EcoEvoRxiv
  36. Sanchez-Tojar A, Moran NP, O'Dea RE, Reinhold K, Nakagawa S (2020) Illustrating the importance of meta-analysing variances alongside means in ecology and evolution. EcoEvoRxiv
  37. Lara CE, Holtmann B, Santos ESA, Nakagawa S (2020) Tongue spots of dunnock nestlings vary in number and position over time but exert no clear influence on parental allocation. EcoEvoRxiv
  38. Lara CE, Holtmann B, Santos ESA, Nakagawa S (2020) Parental feeding decisions in dunnocks from a resource availability perspective: assessing the role of nestling tongue spots and body size. EcoEvoRxiv
  39. Benjamin DJ, Berger J, Johannesson M, Nosek BA, Wagenmakers EJ, Berk R, Bollen K, Brembs B, Brown L, Camerer C, +62 authors (2020) Redefine statistical significance. PsyArXiv
  40. Lara CE, Taylor H, Holtmann B, Johnson S, Santos ESA, Gemmell N, Nakagawa S (2020) Dunnock social status correlates with sperm speed, but fast sperm does not always equal high fitness. EcoEvoRxiv
  41. O'Dea RE, Lagisz M, Hendry AP, Nakagawa S (2019) Developmental temperature affects phenotypic means and variability: a meta-analysis of fish data. EcoEvoRxiv
  42. Pick JL, Khwaja N, Spence MA, Ihle M, Nakagawa S (2019) Counter culture: Causes, extent and solutions of systematic bias in the analysis of behavioural counts. EcoEvoRxiv
  43. Nakagawa S, Samarasinghe G, Haddaway NR, Westgate M, O'Dea RE, Noble D, Lagisz M (2018) Research Weaving: Visualizing the Future of Research Synthesis. EcoEvoRxiv
  44. Parker TH, Greig E, Nakagawa S, Parra M, Dalisio A (2018) Subspecies status and methods explain strength of response to local versus foreign song by oscine birds in meta-analysis. EcoEvoRxiv
  45. Parker TH, Griffith S, Bronstein J, Fidler F, Foster S, Fraser H, Forstmeier W, Gurevitch J, Koricheva J, Seppelt R, Tingley M, Nakagawa S (2018) Empowering peer reviewers to improve transparency. EcoEvoRxiv
  46. Fraser H, Parker TH, Nakagawa S, Barnett A, Fidler F (2018) Questionable Research Practices in Ecology and Evolution. EcoEvoRxiv
  47. Sanchez-Tojar A, Nakagawa S, Sanchez-Fortun M, Martin DA, Ramani S, Girndt A, Bokony V, Kempenaers B, Liker A, Westneat D, Burke T, Schroeder J (2018) Meta-analysis challenges a textbook example of status signalling and demonstrates publication bias. bioRxiv
  48. Nakagawa S, de Villemereuil P (2018) A simple and general method for simultaneously accounting for phylogenetic and species sampling uncertainty via Rubin’s rules in comparative analysis. PeerJ
  49. Fraser H, Parker TH, Nakagawa S, Barnett A, Fidler F (2018) Questionable Research Practices in Ecology and Evolution. OSF Preprints
  50. Pick JL, Nakagawa S, Noble DWA (2018) Reproducible, flexible and high throughput data extraction from primary literature: The metaDigitise R package. bioRxiv
  51. Noble DWA, Nakagawa S (2018) Planned missing data design: stronger inferences, increased research efficiency and improved animal welfare in ecology and evolution. bioRxiv
  52. McGeoch MA, Latombe G, Andrew NR, Nakagawa S, Nipperess DA, Roige M, Marzinelli EM, Campbell AH, Verges A, Thomas T, Steinberg PD, Selwood KE, Hui C (2017)  The application of zeta diversity as a continuous measure of compositional change in ecology. bioRxiv
  53. Nakagawa S, Johnson PCD, Schielzeth H (2017) The coefficient of determination R2 and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded. bioRxiv
  54. de Villemereuil P, Morrissey MB, Nakagawa S, Schielzeth H (2017) Fixed effect variance and the estimation of the heritability: Issues and solutions. bioRxiv
  55. Santos ESA, Nakagawa S (2017) Facultative adjustment of paternal care in the face of female infidelity in dunnocks. bioRxiv
  56. Nakagawa S, Schielzeth H (2017) Extending R2 and intra-class correlation coefficient from generalized linear mixed-effects models: capturing and characterizing biological variation. bioRxiv
  57. Nakagawa S, Schielzeth H (2017) Coefficient of determination R2 and intra-class correlation coefficient ICC from generalized linear mixed-effects models revisited and expanded. bioRxiv
  58. de Villemereuil P, Schielzeth H, Nakagawa S, Morrissey M (2016) General methods for evolutionary quantitative genetic inference from generalised mixed models. bioRxiv
  59. de Villemereuil P, Schielzeth H, Nakagawa S, Morrissey M (2016) General methods for evolutionary quantitative genetic inference from generalised mixed models. bioRxiv
  60. Nakagawa S, de Villemereuil P (2015) A simple and general method for accounting for phylogenetic uncertainty via Rubin’s rules in comparative analysis. PeerJ

NOTE: Bold font indicates our research group members. # indicates equal contribution.
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Created by Losia Lagisz, last modified on June 24, 2015